Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | BACCOPRO_02200 | Not Available | Positive | 2095134 - 2095880 | 28991.8 |
| transcriptional regulator, arac family | BACCOPRO_02201 | Not Available | Negative | 2095885 - 2096709 | 31541.9 |
| hypothetical protein | BACCOPRO_02202 | Not Available | Positive | 2096826 - 2097005 | 7015.71 |
| hypothetical protein | BACCOPRO_02203 | Not Available | Negative | 2097062 - 2098027 | 36395.7 |
| hypothetical protein | BACCOPRO_02204 | Not Available | Negative | 2098047 - 2100371 | 86227.5 |
| hypothetical protein | BACCOPRO_02205 | Not Available | Negative | 2100402 - 2102588 | 82177.5 |
| hypothetical protein | BACCOPRO_02206 | Not Available | Negative | 2102591 - 2103961 | 50148.6 |
| hypothetical protein | BACCOPRO_02207 | Not Available | Negative | 2103974 - 2104927 | 36007.1 |
| hypothetical protein | BACCOPRO_02208 | Not Available | Negative | 2105010 - 2106101 | 39050.4 |
| tetratricopeptide repeat protein | BACCOPRO_02209 | Not Available | Negative | 2106145 - 2107629 | 55811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


