Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02170 | Not Available | Positive | 2060386 - 2060589 | 7928.88 |
| hypothetical protein | BACCOPRO_02171 | Not Available | Positive | 2060711 - 2060878 | 6587.24 |
| hypothetical protein | BACCOPRO_02172 | Not Available | Positive | 2061046 - 2062044 | 38006.2 |
| mg chelatase-like protein | BACCOPRO_02173 | Not Available | Positive | 2062077 - 2063615 | 55378.1 |
| abc transporter, atp-binding protein | BACCOPRO_02174 | Not Available | Negative | 2063620 - 2064294 | 24891.2 |
| efflux abc transporter, permease protein | BACCOPRO_02175 | Not Available | Negative | 2064330 - 2065652 | 50335.8 |
| efflux abc transporter, permease protein | BACCOPRO_02176 | Not Available | Negative | 2065659 - 2066969 | 48834.7 |
| efflux transporter, rnd family, mfp subunit | BACCOPRO_02177 | Not Available | Negative | 2067008 - 2068264 | 46878.4 |
| hypothetical protein | BACCOPRO_02179 | Not Available | Negative | 2068292 - 2068453 | 6139.25 |
| hypothetical protein | BACCOPRO_02178 | Not Available | Positive | 2068392 - 2068730 | 12744.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


