Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02160 | Not Available | Positive | 2055862 - 2056455 | 23203.7 |
| hypothetical protein | BACCOPRO_02161 | Not Available | Positive | 2056431 - 2056766 | 13419.2 |
| hypothetical protein | BACCOPRO_02162 | Not Available | Positive | 2056770 - 2057426 | 25709.3 |
| hypothetical protein | BACCOPRO_02163 | Not Available | Positive | 2057449 - 2057757 | 11732.5 |
| hypothetical protein | BACCOPRO_02164 | Not Available | Positive | 2057771 - 2058181 | 15924.0 |
| muts domain i protein | BACCOPRO_02165 | Not Available | Positive | 2058336 - 2058659 | 12043.5 |
| hypothetical protein | BACCOPRO_02166 | Not Available | Positive | 2058631 - 2059287 | 24980.7 |
| hypothetical protein | BACCOPRO_02168 | Not Available | Negative | 2059262 - 2059456 | 7500.2 |
| hypothetical protein | BACCOPRO_02167 | Not Available | Positive | 2059450 - 2059980 | 19843.1 |
| hypothetical protein | BACCOPRO_02169 | Not Available | Positive | 2059977 - 2060375 | 14968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


