Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 2022087 - 2022159 | Not Available |
| hypothetical protein | BACCOPRO_02101 | Not Available | Negative | 2022254 - 2022436 | 7352.33 |
| hypothetical protein | BACCOPRO_02102 | Not Available | Positive | 2022497 - 2022778 | 11332.9 |
| hypothetical protein | BACCOPRO_02103 | Not Available | Negative | 2023020 - 2023169 | 5535.9 |
| hypothetical protein | BACCOPRO_02104 | Not Available | Positive | 2023548 - 2024120 | 20982.0 |
| hypothetical protein | BACCOPRO_02105 | Not Available | Positive | 2024288 - 2024557 | 9697.11 |
| hypothetical protein | BACCOPRO_02107 | Not Available | Negative | 2024659 - 2024856 | 7236.67 |
| hypothetical protein | BACCOPRO_02106 | Not Available | Positive | 2024837 - 2025220 | 14551.5 |
| hypothetical protein | BACCOPRO_02108 | Not Available | Positive | 2025231 - 2025494 | 9813.12 |
| hypothetical protein | BACCOPRO_02110 | Not Available | Negative | 2025529 - 2025666 | 4870.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


