Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02070 | Not Available | Negative | 2000157 - 2000789 | 23890.6 |
| hypothetical protein | BACCOPRO_02071 | Not Available | Negative | 2000764 - 2002011 | 47575.2 |
| hypothetical protein | BACCOPRO_02072 | Not Available | Negative | 2002008 - 2002166 | 6121.62 |
| hypothetical protein | BACCOPRO_02073 | Not Available | Negative | 2002197 - 2002391 | 7330.04 |
| hypothetical protein | BACCOPRO_02074 | Not Available | Negative | 2002546 - 2003337 | 29680.7 |
| hypothetical protein | BACCOPRO_02076 | Not Available | Negative | 2003388 - 2003630 | 9442.53 |
| hypothetical protein | BACCOPRO_02075 | Not Available | Positive | 2003616 - 2003783 | 6519.96 |
| hypothetical protein | BACCOPRO_02077 | Not Available | Positive | 2003780 - 2003929 | 5683.71 |
| hypothetical protein | BACCOPRO_02078 | Not Available | Negative | 2003970 - 2004509 | 19999.8 |
| conserved hypothetical protein, yfih family | BACCOPRO_02079 | Not Available | Negative | 2004502 - 2005332 | 31174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


