Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_02040 | Not Available | Negative | 1971910 - 1974177 | 83739.1 |
| hypothetical protein | BACCOPRO_02041 | Not Available | Negative | 1974181 - 1975869 | 60867.3 |
| hypothetical protein | BACCOPRO_02042 | Not Available | Negative | 1975866 - 1976756 | 32297.1 |
| sefir domain protein | BACCOPRO_02043 | Not Available | Positive | 1976826 - 1978028 | 46241.4 |
| hypothetical protein | BACCOPRO_02044 | Not Available | Negative | 1978038 - 1979363 | 49096.5 |
| hypothetical protein | BACCOPRO_02045 | Not Available | Negative | 1979354 - 1980331 | 36779.1 |
| phage tail tape measure protein, tp901 family | BACCOPRO_02046 | Not Available | Negative | 1980344 - 1984186 | 139955.0 |
| hypothetical protein | BACCOPRO_02047 | Not Available | Negative | 1984280 - 1984435 | 6022.35 |
| hypothetical protein | BACCOPRO_02048 | Not Available | Negative | 1984477 - 1984854 | 14368.6 |
| hypothetical protein | BACCOPRO_02049 | Not Available | Negative | 1984923 - 1985045 | 4733.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


