Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00007 | Not Available | Negative | 5952 - 7373 | 53888.6 |
| hypothetical protein | BACCOPRO_00008 | Not Available | Negative | 7358 - 8041 | 25284.5 |
| kap family p-loop domain protein | BACCOPRO_00009 | Not Available | Negative | 8116 - 9624 | 58461.3 |
| hypothetical protein | BACCOPRO_00010 | Not Available | Negative | 9625 - 9923 | 11371.6 |
| tigr02688 family protein | BACCOPRO_00011 | Not Available | Negative | 9926 - 12076 | 82398.6 |
| pglz domain protein | BACCOPRO_00012 | Not Available | Negative | 12080 - 14560 | 93862.1 |
| hypothetical protein | BACCOPRO_00013 | Not Available | Negative | 14575 - 17238 | 102330.0 |
| hypothetical protein | BACCOPRO_00014 | Not Available | Negative | 17235 - 18464 | 47544.5 |
| hypothetical protein | BACCOPRO_00015 | Not Available | Negative | 18509 - 22156 | 136795.0 |
| hypothetical protein | BACCOPRO_00016 | Not Available | Negative | 22160 - 22720 | 21846.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


