Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01930 | Not Available | Negative | 1862342 - 1862923 | 22023.3 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | BACCOPRO_01931 | Not Available | Negative | 1863059 - 1864576 | 55718.9 |
| hypothetical protein | BACCOPRO_01932 | Not Available | Positive | 1864608 - 1864736 | 4960.9 |
| cobw/p47k family protein | BACCOPRO_01933 | Not Available | Positive | 1864764 - 1865999 | 46994.9 |
| ribonuclease hii | BACCOPRO_01934 | Not Available | Negative | 1866088 - 1866690 | 22770.3 |
| cysteine desulfurase, sufs subfamily | BACCOPRO_01935 | Not Available | Negative | 1866719 - 1867960 | 45823.8 |
| fes assembly protein sufd | BACCOPRO_01936 | Not Available | Negative | 1867979 - 1869331 | 50974.9 |
| fes assembly atpase sufc | BACCOPRO_01937 | Not Available | Negative | 1869328 - 1870080 | 27763.8 |
| fes assembly protein sufb | BACCOPRO_01938 | Not Available | Negative | 1870119 - 1871570 | 54006.9 |
| cvpa family protein | BACCOPRO_01940 | Not Available | Negative | 1871543 - 1872088 | 19592.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


