Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tigr00659 family protein | BACCOPRO_01910 | Not Available | Negative | 1835132 - 1835827 | 24413.1 |
| lrga family protein | BACCOPRO_01911 | Not Available | Negative | 1835808 - 1836158 | 13073.8 |
| phosphate acetyltransferase | BACCOPRO_01912 | Not Available | Positive | 1836362 - 1837381 | 36117.0 |
| acetate kinase | BACCOPRO_01913 | Not Available | Positive | 1837411 - 1838613 | 43984.4 |
| hypothetical protein | BACCOPRO_01914 | Not Available | Positive | 1838871 - 1839002 | 5084.18 |
| hypothetical protein | BACCOPRO_01915 | Not Available | Negative | 1838999 - 1840411 | 53208.7 |
| hypothetical protein | BACCOPRO_01916 | Not Available | Negative | 1840384 - 1841253 | 32339.5 |
| hypothetical protein | BACCOPRO_01917 | Not Available | Negative | 1841349 - 1842260 | 32839.8 |
| hypothetical protein | BACCOPRO_01918 | Not Available | Negative | 1842384 - 1844699 | 84806.4 |
| hypothetical protein | BACCOPRO_01919 | Not Available | Negative | 1844712 - 1846571 | 68911.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


