Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding enzyme | BACCOPRO_01900 | Not Available | Negative | 1823637 - 1825442 | 68538.5 |
| peptidase dimerization domain protein | BACCOPRO_01901 | Not Available | Positive | 1825654 - 1826718 | 38966.3 |
| peptidase, m23 family | BACCOPRO_01902 | Not Available | Negative | 1826802 - 1828124 | 50659.3 |
| hypothetical protein | BACCOPRO_01903 | Not Available | Negative | 1828121 - 1828957 | 31147.1 |
| tetratricopeptide repeat protein | BACCOPRO_01904 | Not Available | Negative | 1828954 - 1830576 | 62971.6 |
| dutp diphosphatase | BACCOPRO_01905 | Not Available | Negative | 1830764 - 1831198 | 15752.1 |
| hypothetical protein | BACCOPRO_01906 | Not Available | Negative | 1831195 - 1831344 | 5432.71 |
| putative dgtpase | BACCOPRO_01907 | Not Available | Positive | 1831397 - 1832845 | 55075.0 |
| acetyltransferase, gnat family | BACCOPRO_01908 | Not Available | Negative | 1833125 - 1834168 | 39708.6 |
| hypothetical protein | BACCOPRO_01909 | Not Available | Negative | 1834189 - 1835118 | 35527.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


