Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01880 | Not Available | Positive | 1809161 - 1809298 | 5018.19 |
| tetratricopeptide repeat protein | BACCOPRO_01881 | Not Available | Positive | 1809295 - 1810950 | 64863.3 |
| hypothetical protein | BACCOPRO_01882 | Not Available | Positive | 1811141 - 1811776 | 23432.9 |
| hypothetical protein | BACCOPRO_01883 | Not Available | Positive | 1811856 - 1812503 | 23838.6 |
| hypothetical protein | BACCOPRO_01884 | Not Available | Negative | 1812528 - 1812650 | 4612.63 |
| hypothetical protein | BACCOPRO_01885 | Not Available | Negative | 1812677 - 1812910 | 8914.62 |
| hypothetical protein | BACCOPRO_01886 | Not Available | Positive | 1812966 - 1813142 | 6913.35 |
| xanthine permease | BACCOPRO_01887 | Not Available | Negative | 1813237 - 1814568 | 46345.9 |
| xanthine phosphoribosyltransferase | BACCOPRO_01888 | Not Available | Negative | 1814587 - 1815156 | 21130.0 |
| hypothetical protein | BACCOPRO_01889 | Not Available | Negative | 1815153 - 1815284 | 5336.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


