Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01850 | Not Available | Negative | 1779157 - 1779621 | 16697.3 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase | BACCOPRO_01851 | Not Available | Positive | 1779905 - 1780669 | 29634.8 |
| oxidoreductase, fad/fmn-binding protein | BACCOPRO_01852 | Not Available | Positive | 1780682 - 1781908 | 45499.3 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACCOPRO_01853 | Not Available | Positive | 1781905 - 1782756 | 31768.4 |
| carbonate dehydratase | BACCOPRO_01854 | Not Available | Negative | 1782770 - 1783324 | 20781.1 |
| aicarft/impchase bienzyme | BACCOPRO_01855 | Not Available | Positive | 1783442 - 1784620 | 44018.4 |
| hypothetical protein | BACCOPRO_01856 | Not Available | Negative | 1784696 - 1785316 | 22435.0 |
| hypothetical protein | BACCOPRO_01857 | Not Available | Negative | 1785463 - 1785978 | 18945.7 |
| hypothetical protein | BACCOPRO_01858 | Not Available | Negative | 1786145 - 1786336 | 6972.65 |
| hypothetical protein | BACCOPRO_01859 | Not Available | Negative | 1786351 - 1786473 | 4469.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


