Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01790 | Not Available | Positive | 1731525 - 1731725 | 7006.28 |
| hypothetical protein | BACCOPRO_01791 | Not Available | Positive | 1731843 - 1732070 | 8285.87 |
| hypothetical protein | BACCOPRO_01792 | Not Available | Positive | 1732001 - 1732206 | 7584.38 |
| hypothetical protein | BACCOPRO_01793 | Not Available | Positive | 1732207 - 1732501 | 11355.7 |
| hypothetical protein | BACCOPRO_01794 | Not Available | Negative | 1732556 - 1732756 | 7298.24 |
| hypothetical protein | BACCOPRO_01795 | Not Available | Negative | 1732734 - 1733306 | 21141.8 |
| hypothetical protein | BACCOPRO_01796 | Not Available | Negative | 1733307 - 1733743 | 16929.4 |
| hypothetical protein | BACCOPRO_01798 | Not Available | Negative | 1733761 - 1734036 | 10377.5 |
| hypothetical protein | BACCOPRO_01797 | Not Available | Positive | 1733942 - 1734586 | 24933.0 |
| hypothetical protein | BACCOPRO_01799 | Not Available | Negative | 1734570 - 1734779 | 7429.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


