Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01770 | Not Available | Positive | 1719303 - 1719815 | 19189.3 |
| hypothetical protein | BACCOPRO_01771 | Not Available | Positive | 1719910 - 1720497 | 21427.1 |
| bacterial rna polymerase, alpha chain domain protein | BACCOPRO_01772 | Not Available | Positive | 1720508 - 1721263 | 28863.4 |
| hypothetical protein | BACCOPRO_01773 | Not Available | Positive | 1721250 - 1723436 | 83146.4 |
| hypothetical protein | BACCOPRO_01774 | Not Available | Positive | 1723433 - 1723773 | 13545.8 |
| relaxase/mobilization nuclease domain protein | BACCOPRO_01775 | Not Available | Positive | 1723804 - 1724598 | 29602.3 |
| hypothetical protein | BACCOPRO_01776 | Not Available | Positive | 1724555 - 1725010 | 17858.2 |
| hypothetical protein | BACCOPRO_01777 | Not Available | Negative | 1725057 - 1725392 | 12882.7 |
| hypothetical protein | BACCOPRO_01778 | Not Available | Negative | 1725392 - 1726015 | 22079.9 |
| initiator repb protein | BACCOPRO_01779 | Not Available | Negative | 1726189 - 1727172 | 38113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


