Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01760 | Not Available | Positive | 1712582 - 1713009 | 15989.5 |
| hypothetical protein | BACCOPRO_01761 | Not Available | Positive | 1713028 - 1714161 | 41916.0 |
| hypothetical protein | BACCOPRO_01762 | Not Available | Positive | 1714183 - 1714569 | 15650.0 |
| conjugative transposon trak protein | BACCOPRO_01763 | Not Available | Positive | 1714581 - 1715195 | 23640.9 |
| hypothetical protein | BACCOPRO_01764 | Not Available | Positive | 1715207 - 1715581 | 14512.5 |
| hypothetical protein | BACCOPRO_01765 | Not Available | Positive | 1715627 - 1716109 | 18498.3 |
| conjugative transposon tram protein | BACCOPRO_01766 | Not Available | Positive | 1716118 - 1717275 | 43203.2 |
| hypothetical protein | BACCOPRO_01767 | Not Available | Positive | 1717287 - 1717619 | 12935.6 |
| dna (cytosine-5-)-methyltransferase | BACCOPRO_01768 | Not Available | Positive | 1717637 - 1718428 | 30460.7 |
| conjugative transposon tran protein | BACCOPRO_01769 | Not Available | Positive | 1718455 - 1719306 | 32528.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


