Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01750 | Not Available | Positive | 1704359 - 1704685 | 11940.9 |
| hypothetical protein | BACCOPRO_01751 | Not Available | Positive | 1704751 - 1705122 | 13103.7 |
| hypothetical protein | BACCOPRO_01752 | Not Available | Positive | 1705136 - 1705432 | 10908.7 |
| conjugation system atpase, trag family | BACCOPRO_01753 | Not Available | Positive | 1705547 - 1708258 | 104760.0 |
| hypothetical protein | BACCOPRO_01754 | Not Available | Positive | 1708263 - 1708703 | 17108.4 |
| hypothetical protein | BACCOPRO_01755 | Not Available | Positive | 1708728 - 1708997 | 10205.6 |
| hypothetical protein | BACCOPRO_01756 | Not Available | Positive | 1709013 - 1709920 | 33955.6 |
| hypothetical protein | BACCOPRO_01757 | Not Available | Positive | 1709921 - 1711530 | 61200.1 |
| hypothetical protein | BACCOPRO_01758 | Not Available | Positive | 1711527 - 1712252 | 28010.6 |
| hypothetical protein | BACCOPRO_01759 | Not Available | Positive | 1712230 - 1712581 | 13006.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


