Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | BACCOPRO_01720 | Not Available | Positive | 1677659 - 1678645 | 38040.3 |
| hypothetical protein | BACCOPRO_01721 | Not Available | Positive | 1678655 - 1679800 | 44920.0 |
| hypothetical protein | BACCOPRO_01722 | Not Available | Positive | 1679806 - 1680828 | 39631.8 |
| hypothetical protein | BACCOPRO_01723 | Not Available | Positive | 1680825 - 1681535 | 27734.0 |
| glycosyltransferase, group 2 family protein | BACCOPRO_01724 | Not Available | Positive | 1681549 - 1682364 | 31810.0 |
| chain length determinant protein | BACCOPRO_01725 | Not Available | Positive | 1682374 - 1683393 | 37702.5 |
| hypothetical protein | BACCOPRO_01726 | Not Available | Positive | 1683491 - 1684411 | 35833.1 |
| hypothetical protein | BACCOPRO_01727 | Not Available | Positive | 1684402 - 1685652 | 48894.6 |
| hypothetical protein | BACCOPRO_01728 | Not Available | Negative | 1685871 - 1686063 | 7285.67 |
| hypothetical protein | BACCOPRO_01729 | Not Available | Positive | 1686265 - 1687188 | 35735.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


