Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01710 | Not Available | Positive | 1667974 - 1668105 | 4936.91 |
| hypothetical protein | BACCOPRO_01711 | Not Available | Positive | 1668282 - 1668506 | 8725.79 |
| polysaccharide biosynthesis/export protein | BACCOPRO_01712 | Not Available | Positive | 1668499 - 1671018 | 93414.8 |
| hypothetical protein | BACCOPRO_01713 | Not Available | Negative | 1671011 - 1671163 | 5636.79 |
| glycosyltransferase, group 4 family | BACCOPRO_01714 | Not Available | Positive | 1671288 - 1672400 | 41310.1 |
| hypothetical protein | BACCOPRO_01715 | Not Available | Positive | 1672427 - 1673971 | 59009.3 |
| glycosyltransferase, group 2 family protein | BACCOPRO_01716 | Not Available | Positive | 1673968 - 1674756 | 30369.8 |
| glycosyltransferase, group 2 family protein | BACCOPRO_01717 | Not Available | Positive | 1674753 - 1675760 | 39959.2 |
| hypothetical protein | BACCOPRO_01718 | Not Available | Positive | 1675765 - 1676358 | 22503.8 |
| hypothetical protein | BACCOPRO_01719 | Not Available | Positive | 1676493 - 1677659 | 45433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


