Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | BACCOPRO_00160 | Not Available | Negative | 163647 - 164531 | 32982.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BACCOPRO_00161 | Not Available | Positive | 164559 - 165944 | 51807.4 |
| hypothetical protein | BACCOPRO_00162 | Not Available | Negative | 166060 - 167348 | 48701.0 |
| hypothetical protein | BACCOPRO_00163 | Not Available | Negative | 167479 - 168099 | 22142.9 |
| hypothetical protein | BACCOPRO_00164 | Not Available | Negative | 168089 - 168373 | 10395.3 |
| Trna-gln | Not Available | Not Available | Positive | 168730 - 168800 | Not Available |
| hypothetical protein | BACCOPRO_00166 | Not Available | Positive | 169116 - 170093 | 36792.6 |
| hypothetical protein | BACCOPRO_00167 | Not Available | Negative | 170063 - 171073 | 38017.4 |
| hypothetical protein | BACCOPRO_00168 | Not Available | Positive | 171196 - 171351 | 6185.82 |
| hypothetical protein | BACCOPRO_00169 | Not Available | Positive | 171370 - 171603 | 8625.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


