Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| von willebrand factor type a domain protein | BACCOPRO_01660 | Not Available | Negative | 1624544 - 1625542 | 37165.8 |
| hypothetical protein | BACCOPRO_01661 | Not Available | Negative | 1625561 - 1626607 | 39614.5 |
| hypothetical protein | BACCOPRO_01662 | Not Available | Negative | 1626669 - 1627538 | 33660.4 |
| atpase family associated with various cellular activities (aaa) | BACCOPRO_01663 | Not Available | Negative | 1627563 - 1628558 | 37291.4 |
| lysm domain protein | BACCOPRO_01664 | Not Available | Negative | 1628763 - 1629920 | 43020.3 |
| dna-binding protein hu | BACCOPRO_01665 | Not Available | Negative | 1629917 - 1630204 | 10711.1 |
| ribosomal protein s12 methylthiotransferase rimo | BACCOPRO_01666 | Not Available | Negative | 1630224 - 1631522 | 50099.9 |
| signal recognition particle-docking protein ftsy | BACCOPRO_01667 | Not Available | Negative | 1631519 - 1632484 | 34838.1 |
| hypothetical protein | BACCOPRO_01668 | Not Available | Negative | 1632610 - 1632765 | 5799.13 |
| ribosomal protein l33 | BACCOPRO_01669 | Not Available | Negative | 1632775 - 1632963 | 7205.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


