Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01650 | Not Available | Negative | 1616848 - 1617168 | 13011.0 |
| hypothetical protein | BACCOPRO_01651 | Not Available | Negative | 1617140 - 1617601 | 17524.0 |
| hypothetical protein | BACCOPRO_01652 | Not Available | Positive | 1617645 - 1617788 | 5608.95 |
| universal stress family protein | BACCOPRO_01653 | Not Available | Negative | 1617781 - 1618914 | 43381.5 |
| hypothetical protein | BACCOPRO_01654 | Not Available | Negative | 1619028 - 1619282 | 9307.17 |
| pap2 family protein | BACCOPRO_01655 | Not Available | Negative | 1619407 - 1620117 | 26667.1 |
| tetratricopeptide repeat protein | BACCOPRO_01656 | Not Available | Negative | 1620129 - 1620884 | 28369.6 |
| hypothetical protein | BACCOPRO_01657 | Not Available | Negative | 1620905 - 1622737 | 67913.5 |
| tetratricopeptide repeat protein | BACCOPRO_01658 | Not Available | Negative | 1622808 - 1623503 | 27090.0 |
| von willebrand factor type a domain protein | BACCOPRO_01659 | Not Available | Negative | 1623512 - 1624531 | 37887.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


