Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01630 | Not Available | Positive | 1594758 - 1595600 | 31203.1 |
| putative plasmid recombination enzyme | BACCOPRO_01631 | Not Available | Positive | 1595823 - 1597277 | 55387.8 |
| ompa family protein | BACCOPRO_01632 | Not Available | Positive | 1597331 - 1598839 | 54827.1 |
| hypothetical protein | BACCOPRO_01633 | Not Available | Negative | 1598948 - 1599337 | 14723.8 |
| hypothetical protein | BACCOPRO_01634 | Not Available | Negative | 1599513 - 1600106 | 22934.0 |
| hypothetical protein | BACCOPRO_01635 | Not Available | Negative | 1600123 - 1601391 | 49385.7 |
| hypothetical protein | BACCOPRO_01636 | Not Available | Negative | 1601639 - 1602340 | 27559.2 |
| hypothetical protein | BACCOPRO_01637 | Not Available | Negative | 1602412 - 1603599 | 46598.1 |
| hypothetical protein | BACCOPRO_01638 | Not Available | Positive | 1603827 - 1604732 | 35665.5 |
| hypothetical protein | BACCOPRO_01639 | Not Available | Negative | 1605228 - 1605518 | 11206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


