Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01620 | Not Available | Positive | 1589116 - 1589382 | 10263.8 |
| hypothetical protein | BACCOPRO_01621 | Not Available | Negative | 1589539 - 1589907 | 13965.8 |
| hypothetical protein | BACCOPRO_01622 | Not Available | Positive | 1590110 - 1590787 | 26021.1 |
| hypothetical protein | BACCOPRO_01623 | Not Available | Positive | 1590789 - 1591280 | 18903.2 |
| hypothetical protein | BACCOPRO_01624 | Not Available | Negative | 1591369 - 1592019 | 24897.9 |
| hypothetical protein | BACCOPRO_01625 | Not Available | Negative | 1592007 - 1592156 | 6020.46 |
| hypothetical protein | BACCOPRO_01626 | Not Available | Positive | 1592429 - 1593304 | 32735.5 |
| hypothetical protein | BACCOPRO_01627 | Not Available | Positive | 1593320 - 1593772 | 17615.3 |
| hypothetical protein | BACCOPRO_01628 | Not Available | Positive | 1593787 - 1594185 | 15521.6 |
| hypothetical protein | BACCOPRO_01629 | Not Available | Positive | 1594178 - 1594768 | 23020.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


