Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | BACCOPRO_01590 | Not Available | Positive | 1572007 - 1573470 | 56090.9 |
| hypothetical protein | BACCOPRO_01591 | Not Available | Positive | 1573640 - 1573882 | 8843.53 |
| hypothetical protein | BACCOPRO_01592 | Not Available | Positive | 1573879 - 1573998 | 4569.9 |
| hypothetical protein | BACCOPRO_01593 | Not Available | Positive | 1574633 - 1574809 | 6707.83 |
| hypothetical protein | BACCOPRO_01594 | Not Available | Positive | 1574833 - 1575144 | 12092.0 |
| hypothetical protein | BACCOPRO_01595 | Not Available | Positive | 1575145 - 1575402 | 10133.4 |
| hypothetical protein | BACCOPRO_01596 | Not Available | Negative | 1575693 - 1575929 | 9627.44 |
| hypothetical protein | BACCOPRO_01597 | Not Available | Positive | 1576014 - 1576142 | 4589.75 |
| single-strand binding family protein | BACCOPRO_01598 | Not Available | Positive | 1576204 - 1576584 | 14304.9 |
| hypothetical protein | BACCOPRO_01600 | Not Available | Negative | 1576728 - 1576919 | 7418.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


