Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01530 | Not Available | Negative | 1519466 - 1519597 | 4959.18 |
| glycosyl hydrolase family 20, catalytic domain protein | BACCOPRO_01531 | Not Available | Negative | 1519616 - 1521922 | 86274.2 |
| hypothetical protein | BACCOPRO_01532 | Not Available | Negative | 1522238 - 1523127 | 33309.9 |
| hypothetical protein | BACCOPRO_01533 | Not Available | Negative | 1523128 - 1523527 | 14923.9 |
| transcriptional regulator, arac family | BACCOPRO_01534 | Not Available | Positive | 1523607 - 1524410 | 31053.4 |
| hypothetical protein | BACCOPRO_01535 | Not Available | Negative | 1524429 - 1525724 | 49808.9 |
| peptidase, m23 family | BACCOPRO_01536 | Not Available | Positive | 1525978 - 1527240 | 47657.3 |
| hypothetical protein | BACCOPRO_01537 | Not Available | Positive | 1527247 - 1527453 | 7609.34 |
| hypothetical protein | BACCOPRO_01538 | Not Available | Positive | 1527455 - 1527595 | 5671.03 |
| maoc-like protein | BACCOPRO_01539 | Not Available | Positive | 1527607 - 1528071 | 17746.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


