Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01510 | Not Available | Positive | 1501353 - 1501700 | 12912.9 |
| tonb-dependent receptor | BACCOPRO_01511 | Not Available | Positive | 1501922 - 1504360 | 91223.0 |
| phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain ii | BACCOPRO_01512 | Not Available | Positive | 1504373 - 1506118 | 64483.8 |
| putative beta-lactamase | BACCOPRO_01513 | Not Available | Negative | 1506276 - 1507175 | 33678.3 |
| phosphate transport system regulatory protein phou | BACCOPRO_01514 | Not Available | Negative | 1507279 - 1507962 | 26387.6 |
| phosphate abc transporter, atp-binding protein | BACCOPRO_01515 | Not Available | Negative | 1507998 - 1508750 | 27979.7 |
| phosphate abc transporter, permease protein psta | BACCOPRO_01516 | Not Available | Negative | 1508765 - 1509649 | 32161.1 |
| phosphate abc transporter, permease protein pstc | BACCOPRO_01517 | Not Available | Negative | 1509654 - 1510850 | 43019.3 |
| phosphate binding protein | BACCOPRO_01518 | Not Available | Negative | 1510862 - 1511701 | 30977.6 |
| hypothetical protein | BACCOPRO_01519 | Not Available | Negative | 1511840 - 1512790 | 36289.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


