Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb-like protein | BACCOPRO_01500 | Not Available | Positive | 1495798 - 1497531 | 66088.4 |
| hypothetical protein | BACCOPRO_01501 | Not Available | Positive | 1497642 - 1498016 | 14801.7 |
| hypothetical protein | BACCOPRO_01502 | Not Available | Positive | 1498103 - 1498360 | 9805.74 |
| dna repair protein radc | BACCOPRO_01503 | Not Available | Positive | 1498475 - 1498918 | 16316.6 |
| hypothetical protein | BACCOPRO_01504 | Not Available | Positive | 1498996 - 1499289 | 10887.5 |
| hypothetical protein | BACCOPRO_01505 | Not Available | Positive | 1499466 - 1499744 | 10914.2 |
| hypothetical protein | BACCOPRO_01506 | Not Available | Positive | 1499823 - 1500095 | 10423.0 |
| hypothetical protein | BACCOPRO_01507 | Not Available | Positive | 1500127 - 1500483 | 13778.4 |
| hypothetical protein | BACCOPRO_01508 | Not Available | Negative | 1500649 - 1500855 | 8104.07 |
| hypothetical protein | BACCOPRO_01509 | Not Available | Positive | 1500856 - 1501322 | 17665.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


