Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01490 | Not Available | Negative | 1486420 - 1486680 | 9750.82 |
| hypothetical protein | BACCOPRO_01491 | Not Available | Positive | 1486772 - 1490105 | 126240.0 |
| hypothetical protein | BACCOPRO_01492 | Not Available | Positive | 1490106 - 1490773 | 25125.2 |
| reverse transcriptase (rna-dependent dna polymerase) | BACCOPRO_01493 | Not Available | Positive | 1491430 - 1493097 | 64496.6 |
| hypothetical protein | BACCOPRO_01494 | Not Available | Positive | 1493081 - 1494184 | 41866.0 |
| hypothetical protein | BACCOPRO_01495 | Not Available | Negative | 1494171 - 1494290 | 4374.39 |
| hypothetical protein | BACCOPRO_01496 | Not Available | Negative | 1494323 - 1494526 | 7693.26 |
| hypothetical protein | BACCOPRO_01497 | Not Available | Positive | 1494614 - 1495027 | 15826.8 |
| hypothetical protein | BACCOPRO_01498 | Not Available | Positive | 1495020 - 1495145 | 4660.81 |
| hypothetical protein | BACCOPRO_01499 | Not Available | Positive | 1495233 - 1495367 | 5085.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


