Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00140 | Not Available | Negative | 142350 - 144187 | 73383.1 |
| hypothetical protein | BACCOPRO_00141 | Not Available | Negative | 144188 - 144554 | 14675.3 |
| hypothetical protein | BACCOPRO_00142 | Not Available | Negative | 144542 - 145972 | 55668.6 |
| type iii restriction enzyme, res subunit | BACCOPRO_00143 | Not Available | Negative | 146140 - 149106 | 112693.0 |
| dna (cytosine-5-)-methyltransferase | BACCOPRO_00144 | Not Available | Negative | 149108 - 151009 | 72446.7 |
| dna-binding helix-turn-helix protein | BACCOPRO_00145 | Not Available | Negative | 151006 - 151218 | 8037.79 |
| hypothetical protein | BACCOPRO_00146 | Not Available | Positive | 151407 - 151682 | 10835.8 |
| hypothetical protein | BACCOPRO_00147 | Not Available | Positive | 151684 - 152799 | 41722.1 |
| hypothetical protein | BACCOPRO_00148 | Not Available | Positive | 152803 - 153678 | 33523.6 |
| hypothetical protein | BACCOPRO_00149 | Not Available | Positive | 153943 - 154167 | 8683.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


