Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01480 | Not Available | Negative | 1481221 - 1481445 | 8798.87 |
| hypothetical protein | BACCOPRO_01481 | Not Available | Negative | 1481474 - 1482244 | 29324.0 |
| peptidase, m23 family | BACCOPRO_01482 | Not Available | Positive | 1482450 - 1482955 | 18574.8 |
| hypothetical protein | BACCOPRO_01483 | Not Available | Negative | 1483140 - 1483967 | 32366.2 |
| abi-like protein | BACCOPRO_01484 | Not Available | Negative | 1484002 - 1484907 | 35047.4 |
| hypothetical protein | BACCOPRO_01485 | Not Available | Negative | 1484894 - 1485013 | 4616.49 |
| hypothetical protein | BACCOPRO_01486 | Not Available | Positive | 1485039 - 1485176 | 5169.29 |
| hypothetical protein | BACCOPRO_01487 | Not Available | Positive | 1485130 - 1485363 | 8784.92 |
| hypothetical protein | BACCOPRO_01488 | Not Available | Positive | 1485360 - 1485599 | 9089.95 |
| hypothetical protein | BACCOPRO_01489 | Not Available | Positive | 1485702 - 1486343 | 25128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


