Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01460 | Not Available | Negative | 1463072 - 1463347 | 11143.1 |
| peptidase, m23 family | BACCOPRO_01461 | Not Available | Negative | 1463380 - 1464210 | 31266.3 |
| hypothetical protein | BACCOPRO_01462 | Not Available | Negative | 1464230 - 1464613 | 13706.9 |
| site-specific recombinase, phage integrase family | BACCOPRO_01463 | Not Available | Positive | 1464733 - 1465953 | 46504.8 |
| hypothetical protein | BACCOPRO_01464 | Not Available | Positive | 1465966 - 1466349 | 14184.1 |
| hypothetical protein | BACCOPRO_01465 | Not Available | Positive | 1466616 - 1467198 | 22352.6 |
| hypothetical protein | BACCOPRO_01466 | Not Available | Positive | 1467199 - 1467799 | 23368.2 |
| hypothetical protein | BACCOPRO_01467 | Not Available | Positive | 1467830 - 1468054 | 8753.46 |
| hypothetical protein | BACCOPRO_01468 | Not Available | Positive | 1468051 - 1469022 | 37162.6 |
| plasmid recombination enzyme | BACCOPRO_01469 | Not Available | Positive | 1469257 - 1470564 | 50730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


