Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01450 | Not Available | Positive | 1452877 - 1453161 | 11199.3 |
| hypothetical protein | BACCOPRO_01451 | Not Available | Negative | 1453211 - 1453336 | 4580.49 |
| hypothetical protein | BACCOPRO_01452 | Not Available | Positive | 1453641 - 1454120 | 18078.2 |
| hypothetical protein | BACCOPRO_01453 | Not Available | Positive | 1454117 - 1454380 | 10851.7 |
| hypothetical protein | BACCOPRO_01454 | Not Available | Negative | 1454438 - 1456120 | 65187.9 |
| hypothetical protein | BACCOPRO_01455 | Not Available | Negative | 1456125 - 1456730 | 22423.8 |
| hypothetical protein | BACCOPRO_01456 | Not Available | Positive | 1456795 - 1456944 | 5721.74 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosaminidase | BACCOPRO_01457 | Not Available | Negative | 1457012 - 1458571 | 57359.6 |
| muts domain i protein | BACCOPRO_01458 | Not Available | Negative | 1458576 - 1461218 | 101465.0 |
| hypothetical protein | BACCOPRO_01459 | Not Available | Negative | 1461243 - 1463054 | 67004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


