Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01440 | Not Available | Positive | 1447499 - 1447936 | 17377.8 |
| hypothetical protein | BACCOPRO_01441 | Not Available | Positive | 1447911 - 1448387 | 18503.0 |
| hypothetical protein | BACCOPRO_01442 | Not Available | Positive | 1448468 - 1448826 | 14567.1 |
| hypothetical protein | BACCOPRO_01443 | Not Available | Positive | 1449347 - 1449922 | 22508.1 |
| hypothetical protein | BACCOPRO_01444 | Not Available | Positive | 1450350 - 1450931 | 22779.9 |
| hypothetical protein | BACCOPRO_01445 | Not Available | Negative | 1451113 - 1451352 | 8976.6 |
| hypothetical protein | BACCOPRO_01446 | Not Available | Positive | 1451439 - 1451924 | 18813.8 |
| hypothetical protein | BACCOPRO_01447 | Not Available | Positive | 1451950 - 1452195 | 9318.05 |
| hypothetical protein | BACCOPRO_01448 | Not Available | Positive | 1452326 - 1452679 | 13669.3 |
| hypothetical protein | BACCOPRO_01449 | Not Available | Positive | 1452679 - 1452873 | 7390.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


