Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01430 | Not Available | Negative | 1438159 - 1439037 | 34050.2 |
| hypothetical protein | BACCOPRO_01431 | Not Available | Negative | 1439061 - 1440002 | 36290.9 |
| atpase family associated with various cellular activities (aaa) | BACCOPRO_01432 | Not Available | Negative | 1439987 - 1442184 | 82140.4 |
| hypothetical protein | BACCOPRO_01433 | Not Available | Negative | 1442185 - 1442349 | 6084.33 |
| hypothetical protein | BACCOPRO_01434 | Not Available | Negative | 1442346 - 1444118 | 68373.6 |
| putative lysozyme | BACCOPRO_01435 | Not Available | Negative | 1444132 - 1444551 | 15966.2 |
| hypothetical protein | BACCOPRO_01436 | Not Available | Positive | 1444729 - 1445196 | 17243.2 |
| hypothetical protein | BACCOPRO_01437 | Not Available | Positive | 1445208 - 1445367 | 5701.62 |
| hypothetical protein | BACCOPRO_01438 | Not Available | Positive | 1445368 - 1446597 | 47040.1 |
| hypothetical protein | BACCOPRO_01439 | Not Available | Positive | 1446622 - 1447533 | 33923.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


