Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01420 | Not Available | Negative | 1425062 - 1425397 | 12718.5 |
| rhs repeat-associated core domain protein | BACCOPRO_01421 | Not Available | Negative | 1425394 - 1429653 | 160069.0 |
| rhs element vgr protein | BACCOPRO_01422 | Not Available | Negative | 1429682 - 1431442 | 64007.6 |
| hypothetical protein | BACCOPRO_01423 | Not Available | Positive | 1431495 - 1431641 | 5612.92 |
| hypothetical protein | BACCOPRO_01424 | Not Available | Negative | 1431969 - 1432760 | 31145.7 |
| hypothetical protein | BACCOPRO_01425 | Not Available | Negative | 1432767 - 1435103 | 89581.8 |
| hypothetical protein | BACCOPRO_01426 | Not Available | Negative | 1435100 - 1436041 | 35870.6 |
| hypothetical protein | BACCOPRO_01427 | Not Available | Negative | 1436047 - 1436493 | 17216.8 |
| hypothetical protein | BACCOPRO_01428 | Not Available | Negative | 1436490 - 1436990 | 19529.7 |
| hypothetical protein | BACCOPRO_01429 | Not Available | Negative | 1437009 - 1438154 | 43536.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


