Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 1372924 - 1372996 | Not Available |
| thiamine-phosphate kinase | BACCOPRO_01361 | Not Available | Negative | 1373204 - 1374241 | 37955.6 |
| purine nucleoside phosphorylase i, inosine and guanosine-specific | BACCOPRO_01362 | Not Available | Negative | 1374250 - 1375059 | 29889.3 |
| tetraacyldisaccharide 4'-kinase | BACCOPRO_01363 | Not Available | Negative | 1375022 - 1376122 | 41858.9 |
| signal peptide peptidase sppa, 67k type | BACCOPRO_01364 | Not Available | Negative | 1376125 - 1377894 | 65224.0 |
| hypothetical protein | BACCOPRO_01365 | Not Available | Positive | 1378299 - 1379111 | 30347.1 |
| hypothetical protein | BACCOPRO_01366 | Not Available | Positive | 1379186 - 1379455 | 10409.0 |
| cggc domain protein | BACCOPRO_01367 | Not Available | Negative | 1379745 - 1380107 | 13279.2 |
| hypothetical protein | BACCOPRO_01368 | Not Available | Negative | 1380238 - 1380648 | 15806.6 |
| transcriptional regulator, arac family | BACCOPRO_01369 | Not Available | Positive | 1380670 - 1381170 | 19263.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


