Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | BACCOPRO_01340 | Not Available | Positive | 1358682 - 1359500 | 31069.0 |
| hemolysin | BACCOPRO_01341 | Not Available | Positive | 1359524 - 1360507 | 37429.9 |
| hypothetical protein | BACCOPRO_01342 | Not Available | Negative | 1360605 - 1360754 | 5684.93 |
| hypothetical protein | BACCOPRO_01343 | Not Available | Positive | 1361002 - 1361163 | 6211.68 |
| hypothetical protein | BACCOPRO_01344 | Not Available | Negative | 1361368 - 1361706 | 12465.3 |
| hypothetical protein | BACCOPRO_01345 | Not Available | Negative | 1361721 - 1362701 | 38725.0 |
| hypothetical protein | BACCOPRO_01346 | Not Available | Negative | 1362801 - 1363010 | 8048.69 |
| hypothetical protein | BACCOPRO_01347 | Not Available | Negative | 1363020 - 1363856 | 32171.4 |
| hypothetical protein | BACCOPRO_01348 | Not Available | Negative | 1363869 - 1364648 | 29686.9 |
| hypothetical protein | BACCOPRO_01349 | Not Available | Negative | 1364763 - 1365749 | 37594.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


