Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01330 | Not Available | Negative | 1346257 - 1346994 | 27843.0 |
| putative udp-n-acetylmuramate--l-alanine ligase | BACCOPRO_01331 | Not Available | Negative | 1346991 - 1348367 | 51208.5 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | BACCOPRO_01332 | Not Available | Negative | 1348357 - 1349487 | 41002.0 |
| cell cycle protein, ftsw/roda/spove family | BACCOPRO_01333 | Not Available | Negative | 1349547 - 1350878 | 48970.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | BACCOPRO_01334 | Not Available | Negative | 1350889 - 1352223 | 50034.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BACCOPRO_01335 | Not Available | Negative | 1352228 - 1353496 | 47244.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BACCOPRO_01336 | Not Available | Negative | 1353508 - 1354974 | 53393.0 |
| penicillin-binding protein, transpeptidase domain protein | BACCOPRO_01337 | Not Available | Negative | 1354982 - 1357111 | 78906.7 |
| hypothetical protein | BACCOPRO_01338 | Not Available | Negative | 1357114 - 1357467 | 13635.6 |
| s-adenosyl-methyltransferase mraw | BACCOPRO_01339 | Not Available | Negative | 1357474 - 1358388 | 34940.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


