Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01320 | Not Available | Positive | 1336746 - 1336901 | 5748.11 |
| dna gyrase, b subunit | BACCOPRO_01321 | Not Available | Negative | 1336949 - 1338919 | 72998.7 |
| ribosomal protein s20 | BACCOPRO_01322 | Not Available | Negative | 1339118 - 1339372 | 9716.13 |
| Trna-glu | Not Available | Not Available | Positive | 1339415 - 1339486 | Not Available |
| dna repair protein reco | BACCOPRO_01324 | Not Available | Positive | 1339627 - 1340385 | 29101.4 |
| hypothetical protein | BACCOPRO_01325 | Not Available | Negative | 1340391 - 1341683 | 47623.3 |
| abc transporter, atp-binding protein | BACCOPRO_01326 | Not Available | Negative | 1341702 - 1342616 | 34415.5 |
| yqey-like protein | BACCOPRO_01327 | Not Available | Negative | 1342841 - 1343290 | 16149.7 |
| cell division protein ftsz | BACCOPRO_01328 | Not Available | Negative | 1343329 - 1344636 | 47810.8 |
| cell division protein ftsa | BACCOPRO_01329 | Not Available | Negative | 1344682 - 1346253 | 59046.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


