Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01310 | Not Available | Negative | 1328188 - 1329072 | 33108.7 |
| hypothetical protein | BACCOPRO_01311 | Not Available | Negative | 1329098 - 1329553 | 17465.4 |
| hypothetical protein | BACCOPRO_01312 | Not Available | Negative | 1329561 - 1330022 | 17450.7 |
| sigma-70 region 2 | BACCOPRO_01313 | Not Available | Negative | 1330019 - 1330525 | 19941.0 |
| glycosyltransferase, group 2 family protein | BACCOPRO_01314 | Not Available | Positive | 1330676 - 1331665 | 37276.2 |
| dna repair protein radc | BACCOPRO_01315 | Not Available | Positive | 1331665 - 1332357 | 25537.9 |
| putative fes assembly suf system protein | BACCOPRO_01316 | Not Available | Positive | 1332420 - 1332740 | 12110.6 |
| ser/thr phosphatase family protein | BACCOPRO_01317 | Not Available | Positive | 1332752 - 1333564 | 31936.2 |
| hypothetical protein | BACCOPRO_01318 | Not Available | Negative | 1333692 - 1334417 | 26177.0 |
| hypothetical protein | BACCOPRO_01319 | Not Available | Negative | 1334501 - 1336192 | 61733.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


