Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01220 | Not Available | Negative | 1237700 - 1238923 | 46584.4 |
| hypothetical protein | BACCOPRO_01221 | Not Available | Negative | 1238977 - 1240176 | 45577.1 |
| hypothetical protein | BACCOPRO_01222 | Not Available | Negative | 1240379 - 1242043 | 65005.2 |
| tetratricopeptide repeat protein | BACCOPRO_01223 | Not Available | Negative | 1242087 - 1243805 | 65718.8 |
| hypothetical protein | BACCOPRO_01224 | Not Available | Negative | 1243868 - 1245067 | 44883.1 |
| endonuclease/exonuclease/phosphatase family protein | BACCOPRO_01225 | Not Available | Negative | 1245326 - 1246348 | 38574.8 |
| xaa-his dipeptidase | BACCOPRO_01226 | Not Available | Negative | 1246345 - 1247802 | 53644.2 |
| hypothetical protein | BACCOPRO_01227 | Not Available | Positive | 1247955 - 1248188 | 8614.76 |
| outer membrane protein | BACCOPRO_01228 | Not Available | Positive | 1248194 - 1248820 | 23677.6 |
| hypothetical protein | BACCOPRO_01229 | Not Available | Positive | 1248919 - 1249299 | 15282.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


