Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mac 1 | BACCOPRO_01210 | Not Available | Positive | 1225368 - 1226810 | 54623.2 |
| hypothetical protein | BACCOPRO_01211 | Not Available | Positive | 1226835 - 1227710 | 30858.2 |
| acetyltransferase, gnat family | BACCOPRO_01212 | Not Available | Positive | 1227860 - 1228750 | 33977.1 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACCOPRO_01213 | Not Available | Positive | 1228763 - 1229539 | 28347.7 |
| hypothetical protein | BACCOPRO_01214 | Not Available | Negative | 1229556 - 1229705 | 5796.03 |
| hypothetical protein | BACCOPRO_01215 | Not Available | Positive | 1229739 - 1230491 | 28605.7 |
| hypothetical protein | BACCOPRO_01216 | Not Available | Negative | 1230543 - 1230908 | 13907.1 |
| hypothetical protein | BACCOPRO_01217 | Not Available | Positive | 1230909 - 1231877 | 36373.4 |
| hypothetical protein | BACCOPRO_01218 | Not Available | Negative | 1231971 - 1233161 | 44828.4 |
| beta galactosidase small chain | BACCOPRO_01219 | Not Available | Negative | 1233415 - 1237386 | 150146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


