Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein fad-binding domain protein | BACCOPRO_00110 | Not Available | Negative | 112670 - 113872 | 43133.9 |
| electron transfer flavoprotein domain protein | BACCOPRO_00111 | Not Available | Negative | 113878 - 114657 | 28232.0 |
| fad dependent oxidoreductase | BACCOPRO_00112 | Not Available | Negative | 114721 - 115947 | 44367.3 |
| hypothetical protein | BACCOPRO_00113 | Not Available | Negative | 115950 - 117260 | 49189.7 |
| hypothetical protein | BACCOPRO_00114 | Not Available | Positive | 117466 - 118359 | 34108.2 |
| ferritin | BACCOPRO_00115 | Not Available | Positive | 118555 - 119040 | 18424.8 |
| hypothetical protein | BACCOPRO_00117 | Not Available | Negative | 119162 - 119359 | 7342.92 |
| hypothetical protein | BACCOPRO_00116 | Not Available | Positive | 119353 - 119751 | 15503.7 |
| atp:cob(i)alamin adenosyltransferase | BACCOPRO_00118 | Not Available | Positive | 119762 - 120298 | 19955.1 |
| hypothetical protein | BACCOPRO_00119 | Not Available | Positive | 120392 - 120588 | 7610.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


