Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01130 | Not Available | Negative | 1135320 - 1136228 | 32732.0 |
| hypothetical protein | BACCOPRO_01131 | Not Available | Negative | 1136289 - 1137602 | 48679.8 |
| hypothetical protein | BACCOPRO_01132 | Not Available | Negative | 1137605 - 1141360 | 136589.0 |
| hypothetical protein | BACCOPRO_01133 | Not Available | Negative | 1141782 - 1142966 | 42333.4 |
| hypothetical protein | BACCOPRO_01134 | Not Available | Negative | 1143015 - 1143923 | 34495.2 |
| hypothetical protein | BACCOPRO_01135 | Not Available | Negative | 1143926 - 1145713 | 67227.5 |
| hypothetical protein | BACCOPRO_01136 | Not Available | Negative | 1145714 - 1146256 | 20652.9 |
| site-specific recombinase, phage integrase family | BACCOPRO_01137 | Not Available | Negative | 1146563 - 1147243 | 26235.9 |
| hypothetical protein | BACCOPRO_01138 | Not Available | Negative | 1147218 - 1147775 | 21525.2 |
| helicase c-terminal domain protein | BACCOPRO_01139 | Not Available | Negative | 1147843 - 1153584 | 216967.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


