Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain protein | BACCOPRO_01110 | Not Available | Negative | 1111949 - 1112626 | 26137.4 |
| alpha-glucan phosphorylase | BACCOPRO_01111 | Not Available | Negative | 1112823 - 1115393 | 98454.1 |
| starch synthase | BACCOPRO_01112 | Not Available | Negative | 1115434 - 1117101 | 63402.5 |
| hypothetical protein | BACCOPRO_01113 | Not Available | Negative | 1117193 - 1117446 | 9419.61 |
| atp synthase subunit c | BACCOPRO_01114 | Not Available | Negative | 1117501 - 1117962 | 15483.3 |
| v-type atpase 116kda subunit family protein | BACCOPRO_01115 | Not Available | Negative | 1118001 - 1119824 | 66923.0 |
| putative v-type atpase, d subunit | BACCOPRO_01116 | Not Available | Negative | 1119821 - 1120426 | 23533.9 |
| atp synthase alpha/beta family, nucleotide-binding domain protein | BACCOPRO_01117 | Not Available | Negative | 1120448 - 1121767 | 48070.6 |
| atp synthase alpha/beta family, nucleotide-binding domain protein | BACCOPRO_01118 | Not Available | Negative | 1121789 - 1123546 | 66104.6 |
| hypothetical protein | BACCOPRO_01119 | Not Available | Negative | 1123561 - 1124400 | 32435.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


