Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj domain protein | BACCOPRO_01100 | Not Available | Negative | 1102300 - 1103097 | 29500.4 |
| hypothetical protein | BACCOPRO_01101 | Not Available | Negative | 1103146 - 1103280 | 5309.23 |
| hypothetical protein | BACCOPRO_01102 | Not Available | Positive | 1103286 - 1104995 | 63566.3 |
| gmp synthase (glutamine-hydrolyzing) domain protein | BACCOPRO_01103 | Not Available | Positive | 1105293 - 1106033 | 27149.5 |
| gmp synthase (glutamine-hydrolyzing) domain protein | BACCOPRO_01104 | Not Available | Positive | 1106041 - 1106847 | 30277.6 |
| hypothetical protein | BACCOPRO_01105 | Not Available | Positive | 1107077 - 1108174 | 42389.9 |
| hypothetical protein | BACCOPRO_01106 | Not Available | Positive | 1108229 - 1109389 | 44244.3 |
| hypothetical protein | BACCOPRO_01107 | Not Available | Positive | 1109524 - 1110000 | 17509.9 |
| hypothetical protein | BACCOPRO_01108 | Not Available | Negative | 1110079 - 1110516 | 16715.0 |
| histidine kinase a domain protein | BACCOPRO_01109 | Not Available | Negative | 1110663 - 1111952 | 49568.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


