Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | BACCOPRO_00097 | Not Available | Negative | 100566 - 102332 | 66589.6 |
| signal peptidase i | BACCOPRO_00098 | Not Available | Negative | 102349 - 103227 | 34557.9 |
| hypothetical protein | BACCOPRO_00099 | Not Available | Negative | 103218 - 105188 | 76734.6 |
| hypothetical protein | BACCOPRO_00100 | Not Available | Negative | 105205 - 106191 | 38138.4 |
| Trna-ala | Not Available | Not Available | Positive | 109373 - 109449 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 109530 - 109606 | Not Available |
| hypothetical protein | BACCOPRO_00103 | Not Available | Positive | 111274 - 111612 | 13272.5 |
| hypothetical protein | BACCOPRO_00107 | Not Available | Negative | 111654 - 111881 | 8681.33 |
| hypothetical protein | BACCOPRO_00108 | Not Available | Negative | 112137 - 112301 | 6496.26 |
| Trna-leu | Not Available | Not Available | Positive | 112527 - 112610 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


