Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01070 | Not Available | Negative | 1073374 - 1073991 | 23565.5 |
| hypothetical protein | BACCOPRO_01071 | Not Available | Negative | 1074029 - 1074391 | 13752.5 |
| conjugation system atpase, trag family | BACCOPRO_01072 | Not Available | Negative | 1074449 - 1076953 | 96414.8 |
| hypothetical protein | BACCOPRO_01073 | Not Available | Negative | 1076950 - 1077282 | 12630.7 |
| conjugative transposon protein trae | BACCOPRO_01074 | Not Available | Negative | 1077293 - 1077604 | 10705.1 |
| hypothetical protein | BACCOPRO_01075 | Not Available | Positive | 1077658 - 1077804 | 5562.1 |
| hypothetical protein | BACCOPRO_01076 | Not Available | Negative | 1077808 - 1078545 | 27611.4 |
| hypothetical protein | BACCOPRO_01077 | Not Available | Negative | 1078542 - 1078904 | 13684.4 |
| hypothetical protein | BACCOPRO_01078 | Not Available | Negative | 1078929 - 1079378 | 17097.3 |
| hypothetical protein | BACCOPRO_01079 | Not Available | Negative | 1079384 - 1080139 | 28299.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


