Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| firmicute fructose-1,6-bisphosphatase | BACCOPRO_01060 | Not Available | Positive | 1064590 - 1066587 | 76767.7 |
| hypothetical protein | BACCOPRO_01061 | Not Available | Negative | 1066611 - 1066958 | 13535.6 |
| hypothetical protein | BACCOPRO_01062 | Not Available | Negative | 1066955 - 1067461 | 19269.9 |
| chc2 zinc finger domain protein | BACCOPRO_01063 | Not Available | Negative | 1067480 - 1068358 | 32946.5 |
| hypothetical protein | BACCOPRO_01064 | Not Available | Negative | 1068367 - 1068942 | 20996.2 |
| conjugative transposon tran protein | BACCOPRO_01065 | Not Available | Negative | 1068945 - 1069991 | 39529.8 |
| conjugative transposon tram protein | BACCOPRO_01066 | Not Available | Negative | 1069988 - 1071337 | 48789.9 |
| hypothetical protein | BACCOPRO_01067 | Not Available | Negative | 1071318 - 1071626 | 11736.3 |
| conjugative transposon trak protein | BACCOPRO_01068 | Not Available | Negative | 1071632 - 1072255 | 24030.7 |
| conjugative transposon traj protein | BACCOPRO_01069 | Not Available | Negative | 1072366 - 1073370 | 37200.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


