Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01030 | Not Available | Positive | 1032858 - 1033124 | 10556.0 |
| hypothetical protein | BACCOPRO_01031 | Not Available | Positive | 1033125 - 1033305 | 7079.89 |
| hypothetical protein | BACCOPRO_01032 | Not Available | Positive | 1033510 - 1034532 | 38997.8 |
| hypothetical protein | BACCOPRO_01033 | Not Available | Positive | 1034561 - 1034761 | 7105.68 |
| hypothetical protein | BACCOPRO_01034 | Not Available | Positive | 1034831 - 1035928 | 41087.9 |
| signal peptidase i | BACCOPRO_01035 | Not Available | Positive | 1035940 - 1036821 | 34223.4 |
| hypothetical protein | BACCOPRO_01036 | Not Available | Positive | 1036803 - 1037063 | 9470.71 |
| tetratricopeptide repeat protein | BACCOPRO_01037 | Not Available | Positive | 1037063 - 1038478 | 53057.3 |
| hypothetical protein | BACCOPRO_01038 | Not Available | Positive | 1038465 - 1040471 | 76208.3 |
| glycosyl hydrolase family 16 | BACCOPRO_01039 | Not Available | Positive | 1040522 - 1041325 | 31077.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


